5-Pyrimidinylboronic acid CAS#: 109299-78-7; ChemWhat Code: 13749

IdentificationPhysical DataSpectra
Route of Synthesis (ROS)Safety and HazardsOther Data

Identification

Product Name5-Pyrimidinylboronic acid
IUPAC Namepyrimidin-5-ylboronic acid
Molecular Structure
CAS Registry Number 109299-78-7
EINECS NumberNo data available
MDL NumberMFCD03002366
Beilstein Registry NumberNo data available
Synonymspyrimidine 5-boronic acidpyrimidin-5-yl boronic acid5-pyrimidineboronic acid5-pyrimidinylboronic acid5-pyrimidylboronic acidpyrimidine-5-ylboronic acidpyrimidinyl-5-boronic acid
Molecular FormulaC4H5BN2O2
Molecular Weight123.908
InChIInChI=1S/C4H5BN2O2/c8-5(9)4-1-6-3-7-2-4/h1-3,8-9H
InChI KeyHZFPPBMKGYINDF-UHFFFAOYSA-N
Canonical SMILESOB(O)c1cncnc1
Patent Information
Patent IDTitlePublication Date
WO2024/133014PHENYLPIPERIDINE DERIVATIVES AS INHIBITORS OF GLUTAMINYL-PEPTIDE CYCLOTRANSFERASE AND GLUTAMINYL-PEPTIDE CYCLOTRANSFERASE LIKE PROTEIN2024
CN112375071Organic light-emitting compound and preparation method and application thereof2021

Physical Data

AppearanceOff-white powder
SolubilityNo data available
Flash PointNo data available
Refractive indexNo data available
SensitivityNo data available

Spectra

Description (NMR Spectroscopy)Nucleus (NMR Spectroscopy)Solvents (NMR Spectroscopy)Temperature (NMR Spectroscopy), °C Frequency (NMR Spectroscopy), MHz
Spectrum11BCD3OD
1Hdeuteromethanol250
Chemical shifts1Hdimethylsulfoxide-d6
Chemical shifts, Spectrum13Cdimethylsulfoxide-d6
Description (IR Spectroscopy)Solvent (IR Spectroscopy)Temperature (IR Spectroscopy), °C
SpectrumCCl414.85 – 54.85
Description (Mass Spectrometry)
high resolution mass spectrometry (HRMS), electrospray ionisation (ESI), spectrum
high resolution mass spectrometry (HRMS), electrospray ionisation (ESI), spectrum
liquid chromatography mass spectrometry (LCMS), spectrum
LCMS (Liquid chromatography mass spectrometry)
CI (Chemical ionization)

Route of Synthesis (ROS)

Route of Synthesis (ROS) of 5-Pyrimidinylboronic acid CAS# 109299-78-7
Route of Synthesis (ROS) of 5-Pyrimidinylboronic acid CAS# 109299-78-7
ConditionsYield
With cesium fluoride; tetrakis(triphenylphosphine) palladium(0) In methanol; 1,2-dimethoxyethane at 120℃; for 1h; Inert atmosphere; microwave irradiation;93%
With tetrakis(triphenylphosphine) palladium(0); cesium fluoride In methanol; 1,2-dimethoxyethane at 120℃; for 1.25h; Inert atmosphere; Microwave irradiation;93%

Safety and Hazards

Pictogram(s)corrosionexclamation-mark
SignalDanger
GHS Hazard StatementsH315 (100%): Causes skin irritation [Warning Skin corrosion/irritation]
H318 (87%): Causes serious eye damage [Danger Serious eye damage/eye irritation]
H319 (13%): Causes serious eye irritation [Warning Serious eye damage/eye irritation]
H335 (98.7%): May cause respiratory irritation [Warning Specific target organ toxicity, single exposure; Respiratory tract irritation]
Information may vary between notifications depending on impurities, additives, and other factors.
Precautionary Statement CodesP261, P264, P264+P265, P271, P280, P302+P352, P304+P340, P305+P351+P338, P305+P354+P338, P317, P319, P321, P332+P317, P337+P317, P362+P364, P403+P233, P405, and P501
(The corresponding statement to each P-code can be found at the GHS Classification page.)

Other Data

TransportationNONH for all modes of transport
Under the room temperature and away from light
HS CodeNo data available
StorageUnder the room temperature and away from light
Shelf Life1 year
Market PriceUSD
Druglikeness
Lipinski rules component
Molecular Weight123.907
logP-1.246
HBA4
HBD2
Matching Lipinski Rules4
Veber rules component
Polar Surface Area (PSA)66.24
Rotatable Bond (RotB)1
Matching Veber Rules2
Use Pattern
Suzuki–Miyaura Coupling Reactions Widely used as a boronic acid building block in palladium-catalyzed cross-coupling reactions with aryl or vinyl halides. Enables the synthesis of pyrimidine-containing biaryl and heteroaryl compounds
Pharmaceutical Intermediates Serves as a key intermediate in the preparation of drug candidates, especially kinase inhibitors, antiviral agents, and anticancer compounds that incorporate the pyrimidine motif. 
 Agrochemical Synthesis Applied in the design and synthesis of heteroaryl derivatives used in herbicides, fungicides, and insecticides
Material Science Sometimes employed in the development of functional materials, such as conjugated heteroaryl polymers or ligands for coordination chemistry. 
Medicinal Chemistry Research Useful for structure–activity relationship (SAR) studies, introducing pyrimidine groups into molecules to modulate biological activity and improve binding affinity.

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