Lefamulin CAS#: 1061337-51-6; ChemWhat Code: 1417556

IdentificationPhysical DataSpectra
Route of Synthesis (ROS)Safety and HazardsOther Data

Identification

Product NameLefamulin
IUPAC Name[(1S,2R,3S,4S,6R,7R,8R,14R)-4-ethenyl-3-hydroxy-2,4,7,14-tetramethyl-9-oxo-6-tricyclo[5.4.3.01,8]tetradecanyl] 2-[(1R,2R,4R)-4-amino-2-hydroxycyclohexyl]sulfanylacetate
Molecular StructureStructure of Lefamulin CAS 1061337-51-6
CAS Registry Number 1061337-51-6
MDL NumberMFCD28963989
SynonymsLefamulin
1061337-51-6
BC-3781
CHEMBL3291398
Xenleta
1061337-51-6 (free base)
(3aR,4R,5R,7S,8S,9R,9aS,12R)-8-hydroxy-4,7,9,12-tetramethyl-3-oxo-7-vinyldecahydro-4,9a-propanocyclopenta[8]annulen-5-yl 2-(((1R,2R,4R)-4-amino-2-hydroxycyclohexyl)thio)acetate
BC3781
compound 7 [PMID: 24874438]
Lefamulin (USAN/INN)
Lefamulin(BC-3781)
Lefamulin(BC-3781)?
SCHEMBL19766421
GTPL10824
DTXSID101027896
Acetic acid, 2-[[(1R,2R,4R)-4-amino-2-hydroxycyclohexyl]thio]-, (3aS,4R,5S,6S,8R,9R,9aR,10R)-6-ethenyldecahydro-5-hydroxy-4,6,9,10-tetramethyl-1-oxo-3a,9-propano-3aH-cyclopentacycloocten-8-yl ester
EX-A3600
BDBM50019649
AKOS040759180
HY-16908
TS-09691
CS-0012945
NS00073375
D11631
Q27253537
(3aS,4R,5S,6S,8R,9R,9aR,10R)-6-ethenyl-5-hydroxy-4,6,9,10-tetramethyl-1-oxodecahydro-3a,9-propanocyclopenta[8]annulen-8-yl {[(1R,2R,4R)-4-amino-2-hydroxycyclohexyl]sulfanyl}acetate
[(1S,2R,3S,4S,6R,7R,8R,14R)-4-ethenyl-3-hydroxy-2,4,7,14-tetramethyl-9-oxo-6-tricyclo[5.4.3.01,8]tetradecanyl] 2-[(1R,2R,4R)-4-amino-2-hydroxycyclohexyl]sulfanylacetate
62B
Molecular FormulaC28H45NO5
Molecular Weight507.7
InChIInChI=1S/C28H45NO5S/c1-6-26(4)14-22(34-23(32)15-35-21-8-7-18(29)13-20(21)31)27(5)16(2)9-11-28(17(3)25(26)33)12-10-19(30)24(27)28/h6,16-18,20-22,24-25,31,33H,1,7-15,29H2,2-5H3/t16-,17+,18-,20-,21-,22-,24+,25+,26-,27+,28+/m1/s1 
InChI KeyKPVIXBKIJXZQJX-FCEONZPQSA-N
Canonical SMILESC[C@@H]1CC[C@@]23CCC(=O)[C@H]2[C@@]1([C@@H](C[C@@]([C@H]([C@@H]3C)O)(C)C=C)OC(=O)CS[C@@H]4CC[C@H](C[C@H]4O)N)C  
Patent Information
Patent IDTitlePublication Date
EP4338732LEFAMULIN AND ITS DERIVATIVES FOR USE IN THE TREATMENT OF TULAREMIA2024
WO2021/209174THERAPEUTIC USE OF PLEUROMUTILINS2021
EP1972618Pleuromutilin derivatives for the treatment of diseases mediated by microbes2008

Physical Data

AppearanceSolid

Spectra

Nucleus (NMR Spectroscopy)Solvents (NMR Spectroscopy)Frequency (NMR Spectroscopy), MHz
1Hchloroform-d1400
Description (UV/VIS Spectroscopy)
Absorption maxima

Route of Synthesis (ROS)

Route of Synthesis (ROS) of Lefamulin CAS 1061337-51-6
Route of Synthesis (ROS) of Lefamulin CAS 1061337-51-6
ConditionsYield
Stage #1: 14-O-{(1R,2R,4R)-[(2,2,2-trifluoroacetyl)-amino-2-hydroxy-cyclohexyl-sulfanyl]-acetyl}-mutilin With water; potassium carbonate In methanol at 40 – 45℃; for 5h; Industry scale;
Stage #2: With potassium carbonate In dichloromethane; water; isopropyl alcohol at 0 – 25℃; for 1.5h; Industry scale;

Experimental Procedure
Example 714-0-{[(lR,2R,4R)-4-Amino-2-hydroxy-cyclohexylsuIfanyl]-acetyl}-mutilin, crystalline Form 2; 72.7 g of crude 14-O-{[(l/?,2 ?,4i?)-4-[(2,2,2-Trifluoro-acetyl)-amino-2-hydroxy-cyclohexyl- sulfanyl] -acetyl} -mutilin, 419.9 ml of methanol and 168 ml of water were charged to a flask and the mixture obtained was warmed to 40 to 45°C. To the mixture obtained 67.3 g ofK2CO3 was added and the mixture obtained was stirred at 40 to 45 °C for 5 h. The reaction was followed by HPLC until completion. Upon completion of the reaction, the mixture obtained was cooled to 20 to 25 °C, 588 ml of CH2C12 and 588 ml of 2 M phosphoric acid were added and the mixture obtained was stirred at 20 to 25 °C for 15 min. The mixture obtained was filtered biphasically, separated, and the organic layer obtained was extracted with 588 ml of 1 M phosphoric acid. The phases obtained were separated and to the combined aqueous (product) layers obtained was added 588 ml of CH2C12 and the mixture obtained was cooled to 10 to 15 °C. To the mixture obtained 6 M NaOH was added drop wise at <25 °C until a pH of >9 was reached (275 ml required). The mixture obtained was filtered biphsaically and the layers obtained were separated. The organic (product) layer obtained was concentrated to approximately 5 volumes in vacuo at <40°C, 176 ml of CH2CI2 was added and the mixture obtained was concentrated once more to 2 vols in vacuo at <40°C. To the concentrate obtained 323.5 ml of n-butanol was added dropwise, the mixture obtained was concentrated to 5 volumes in vacuo at <40°C and the concentrate obtained was stirred at 20 to 25 °C for 2 h. The mixture obtained was filtered, the precipitate obtained was washed with 117.6 ml of w-butanol and the solid obtained was dried overnight in vacuo at 40°C producing 44.2 g of 14-0-{[(lR,2R,4R)-4-amino-2-hydroxy-cyclohexylsulfanyl]-acetyl}- mutilin in crystalline Form 2. 44.2 g of crude 14-0-{[(lR,2R,4R)-4-amino-2-hydroxy-cyclohexylsulfanyl]-acetyl}-mutilin was charged to a clean vessel and 221 ml of w-butanol was added. The mixture obtained was heated to 88 to 92 °C, stirred for 40 min, allowed to cool at a steady rate over 3 h to 40 to 45 °C and stirred for a further 2 h. The mixture obtained was filtered, washed with 44.2 ml of «-butanol followed by 44.2 ml of MTBE and dried in vacuo at <40°C.37.6 g of crystalline 14-O-{[(l ?,2J?,4i?)-4-amino-2-hydroxy-cyclohexylsulfanyl]-acetyl}- mutilin in crystalline Form 2 was obtained in the form of a white crystalline solid.The 1H NMR pattern confirms the structure of 14-O-{[(li?,2i?,4i?)-4-amino-2-hydroxy- cyclohexylsulfanyl] -acetyl }-mutilin. The NMR pattern for 14-O-{[(lif,2 ?,4i?)-4-amino-2- hydroxy-cyclohexylsulfanyl]-acetyl}-mutilin is described in example 4.

Safety and Hazards

Pictogram(s)corrosionexclamation-markhealth-hazardenvironment
SignalDanger
GHS Hazard StatementsH302 (50%): Harmful if swallowed [Warning Acute toxicity, oral]
H315 (50%): Causes skin irritation [Warning Skin corrosion/irritation]
H317 (50%): May cause an allergic skin reaction [Warning Sensitization, Skin]
H318 (50%): Causes serious eye damage [Danger Serious eye damage/eye irritation]
H330 (50%): Fatal if inhaled [Danger Acute toxicity, inhalation]
H411 (50%): Toxic to aquatic life with long lasting effects [Hazardous to the aquatic environment, long-term hazard]
Precautionary Statement CodesP260, P261, P264, P264+P265, P270, P271, P272, P273, P280, P284, P301+P317, P302+P352, P304+P340, P305+P354+P338, P316, P317, P320, P321, P330, P332+P317, P333+P317, P362+P364, P391, P403+P233, P405, and P501
(The corresponding statement to each P-code can be found at the GHS Classification page.)

Other Data

HS Code
StorageUnder room temperature away from light
Shelf Life2 years
Market Price
Druglikeness
Lipinski rules component
Molecular Weight507.735
logP-0.043.512
HBA6
HBD3
Matching Lipinski Rules3
Veber rules component
Polar Surface Area (PSA)135.15
Rotatable Bond (RotB)6
Matching Veber Rules2
Use Pattern
Lefamulin CAS#: 1061337-51-6 is a pleuromutilin class antibiotic used to treat community-acquired bacterial pneumonia (CABP) in adult patients caused by susceptible microorganisms. To minimize the emergence of resistant bacteria and preserve the efficacy of Lefamulin and other antibiotics, it should be used only for the treatment or prevention of confirmed or highly suspected bacterial infections.

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